帳號:guest(216.73.216.146)          離開系統
字體大小: 字級放大   字級縮小   預設字形  

詳目顯示

以作者查詢圖書館館藏以作者查詢臺灣博碩士論文系統以作者查詢全國書目
作者(中文):林彥宏
作者(外文):Lin, Yen-Hung
論文名稱(中文):秀麗隱桿線蟲之磷脂酰肌醇運輸蛋白質-1基因介導壽命調控之機制研究
論文名稱(外文):The mechanism study of phosphatidylinositol transfer protein-1 mediated lifespan regulation in Caenorhabditis elegans
指導教授(中文):汪宏達
指導教授(外文):Wang, Horng-Dar
口試委員(中文):許翱麟
金翠庭
陳昌熙
潘俊良
口試委員(外文):Hsu, Ao-Lin
Ching, Tsiu-Ting
Chen, Chang-Shi
Pan, Chun-Liang
學位類別:博士
校院名稱:國立清華大學
系所名稱:生物科技研究所
學號:101080818
出版年(民國):107
畢業學年度:106
語文別:英文
論文頁數:64
中文關鍵詞:磷脂酰肌醇運輸蛋白質-1長壽雷帕黴素標靶胰島素/類胰島素生長因子訊號秀麗隱桿線蟲
外文關鍵詞:Phosphatidylinositol transfer protein-1LongevityTarget of rapamycinInsulin/ insulin-like growth factor (IGF-1) signalingC. elegans
相關次數:
  • 推薦推薦:0
  • 點閱點閱:88
  • 評分評分:*****
  • 下載下載:0
  • 收藏收藏:0
脂質代謝在健康與老化中扮演著很重要的腳色。改變脂質的代謝在許多物種中會影響壽命的長短。然而,對於脂質代謝的改變影響壽命的下游調節機制仍然還有許多地方需要釐清。我先前於「老化細胞」期刊中已經證實了大量表現參與磷脂酰肌醇循環代謝的二醯甘油酯脂解酶或者是降低二醯甘油酯酵素的基因表現會經由降低雷帕黴素標靶 (TOR)訊號傳遞而增加了果蠅與線蟲的壽命與氧化壓力反應。磷脂酰肌醇運輸蛋白質-1(PITP-1)是位於磷酸肌醇(PPIs)代謝循環路徑中做為磷脂酰肌醇(PI)的運輸者幫助回收磷酸肌醇這一些磷脂質。然而,對於參與同一代謝路徑的磷脂酰肌醇運輸蛋白質-1是否能調控壽命依然未知。在這一份論文中,我報導了降低磷脂酰肌醇運輸蛋白質-1延長了線蟲的壽命,而大量表現磷脂酰肌醇運輸蛋白質-1則縮短線蟲的壽命。除此之外,降低脂酰肌醇運輸蛋白質-1基因表現會舒緩老化引起的癱瘓以及降低的行動能力,這建議著降低磷脂酰肌醇運輸蛋白質-1不但能夠促進長壽還能延緩老化相關的失調。我也發現在進入繁殖後期年齡之前於神經組織中降低磷脂酰肌醇運輸蛋白質-1對於延長壽命是很重要的。使壽命延長的至少其中一個機制是由於減少的TOR訊號,這使得減少的磷酸化S6蛋白質在低磷脂酰肌醇運輸蛋白質-1表現的線蟲中被偵測到,而且以遺傳地或是藥物地方式抑制TOR活性並不能進一步地增加低磷脂酰肌醇運輸蛋白質-1表現的線蟲那延長的壽命。有趣的是,降低磷脂酰肌醇運輸蛋白質-1雖然會減少磷酸化的AKT,但是這並不會促進DAF-16進入細胞核中,也不會增強DAF-16在核內的活性。而且降低磷脂酰肌醇運輸蛋白質-1所延長的壽命是和DAF-16無關的。代替DAF-16,胰島素/類胰島素生長因子(IGF-1)訊號(IIS)的下游轉錄因子SKN-1對於降低磷脂酰肌醇運輸蛋白質-1所延長的壽命是必要的。雖然降低磷脂酰肌醇運輸蛋白質-1後所延長的壽命並不需要DAF-16並參與,但是DAF-16會扮演一個上游的因子調控磷脂酰肌醇運輸蛋白質-1的轉錄。而在磷脂酰肌醇運輸蛋白質-1突變株中偵測到降低的磷脂酸可能說明了降低的TOR訊號中的磷酸化S6蛋白質以及磷酸化AKT。更進一步地,次世代定序資料指出一些被SKN-1調控的膠原蛋白基因表現都在磷脂酰肌醇運輸蛋白質-1突變株中上升,這建議著增加的膠原蛋白也對降低磷脂酰肌醇運輸蛋白質-1的長壽有著貢獻。我的論文揭發了一個磷脂酰肌醇運輸蛋白質-1的新功能,這個功能連接了脂質代謝與IIS與TOR訊號參與的壽命調控。這將帶給磷脂酰肌醇運輸蛋白質-1一個對於壽明調控的新的見解。這個訊息將會幫忙促進一個新的治療老化相關疾病的設計方向。
Lipid metabolism plays an important role in health and aging. Altering lipid metabolism affects lifespan in many species. Yet, the underlying regulatory mechanisms how altering lipid metabolism affects lifespan remain to be more elucidated. My previous study in Aging Cell has demonstrated that overexpression of diacylglycerol lipase or knockdown of DAG kinase, which are involved in phosphoinositides (PPIs) turnover, increases lifespan and oxidative stress response by reducing target of rapamycin (TOR) signaling in both Drosophila and C. elegans. Phosphatidylinositol transfer protein-1 (PITP-1) functions as phosphatidylinositol (PI) transporter in PPIs turnover to help the phospholipids recycling. However, whether PITP-1 can regulate lifespan remains unknown. In this thesis, I report that reduced pitp-1 expression extends lifespan, whereas overexpression of pitp-1 reduces lifespan in C. elegans. In addition, pitp-1 knockdown attenuates age-induced paralysis and decreased motility, suggesting reduced pitp-1 not only can promote longevity but also retard aging-related disorder. I also reveal reducing pitp-1 in neuronal tissue and before post-reproductive age both are critical for the lifespan extension. The lifespan extension at least for one mechanism is due to decreased TOR signaling which decreased p-S6K level is detected in pitp-1-knockdown worms and genetically or pharmacologically blockage of TOR activity cannot further enhance the extended lifespan in pitp-1-knockdown worms. Interestingly, knockdown of pitp-1 decreases p-AKT levels but it does not promote DAF-16 nuclear localization neither enhance DAF-16 nuclear activity. The longevity of reduced pitp-1 is also independent of DAF-16. Instead of DAF-16, the Insulin/ insulin-like growth factor (IGF-1) signaling (IIS) downstream transcription factor, SKN-1, is required for the lifespan extension by reducing pitp-1. Although DAF-16 is not required in reduced-pitp-1-mediated longevity, DAF-16 acts as a upstream factor of pitp-1 to negatively regulate the transcription of pitp-1 for lifespan regulation. The lowered PA levels are detected in pitp-1 mutants which may account for the lowered p-S6K of TOR and p-AKT levels. Furthermore, RNAseq data indicate that the upregulation of some collagen genes regulated by SKN-1 is detected in two pitp-1 mutants, suggesting the increased collagen by pitp-1 reduction may also contribute to the longevity. My thesis findings uncover a novel function of pitp-1 connecting lipid metabolism to lifespan regulation which participates in IIS and TOR signaling. It sheds new insight into pitp-1 in lifespan regulation. The information may help promoting a new therapeutic design for aging-related diseases.
Content
Abstract....................................................................................................................... I
中文摘要.................................................................................................................... III
誌謝................................................................................................................................V
Content ....................................................................................................................VII
Introduction.............................................................................................................. 1
Materials and methods ....................................................................................... 7
C. elegans strains and maintenance ............................................................. 7
RNA interference (RNAi) .................................................................................... 7
Lifespan analysis................................................................................................... 8
RNA extraction and Reverse transcription ................................................................. 8
Real-time PCR (Q-PCR) ........................................................................................ 9
Paralysis assay ..................................................................................................... 10
Motility assay ........................................................................................................ 10
Fecundity assay .................................................................................................... 10
Development assay ............................................................................................. 11
Oxidative stress test ........................................................................................... 11
Western blots ......................................................................................................... 11
Transgenic reporter assay ............................................................................... 12
Lipid analysis.......................................................................................................... 13
RNA sequencing .................................................................................................... 13
Results......................................................................................................................... 15
Reduced pitp-1 expression extends lifespan in C. eleganspitp-1 negatively
regulates lifespan ................................................................................................. 15
Neuronal pitp-1 knockdown is critical for the lifespan extension ........................... 16
Reduced pitp-1 attenuates age-induced motility degeneration in C. elegans ........ 17
Reduced pitp-1 does not affect fecundity and body size but delays development 17
VIII
pitp-1 knockdown-mediated lifespan extension occurs before post-reproductive
age ............................................................................................................................ 18
Reduced pitp-1 does not increase oxidative stress tolerance ................................. 19
Reduced pitp-1 or dgk-5 extends lifespan via common pathways .......................... 19
Decreased pitp-1 reduces TOR signaling.................................................................. 20
Reduced TOR signaling is one of the mechanisms which contributes to pitp-1-
mediated lifespan extension .................................................................................... 20
Knockdown of pitp-1 reduces p-AKT level in day-7 adult worms ............................ 21
pitp-1-mediated lifespan extension is independent of DAF-16 ............................... 22
Reduced Insulin/IGF-1 signaling and pitp-1 probably share a common pathway to
promote longevity.................................................................................................... 23
IIS signaling regulates pitp-1 transcription by DAF-16 ............................................. 23
pitp-1 mutants show a trend of decreased PA level ................................................ 24
Collagen synthesis genes are upregulated in pitp-1 mutants by RNA seq .............. 25
Discussion .................................................................................................................... 26
Figures and Tables ....................................................................................................... 31
References ................................................................................................................... 61
Ackerman, D., & Gems, D. (2012). The mystery of C. elegans aging: an emerging role for fat. Distant parallels between C. elegans aging and metabolic syndrome? Bioessays, 34(6), 466-471. doi:10.1002/bies.201100189
An, J. H., & Blackwell, T. K. (2003). SKN-1 links C. elegans mesendodermal specification to a conserved oxidative stress response. Genes Dev, 17(15), 1882-1893. doi:10.1101/gad.1107803
Bartke, A. (2017). Somatic growth, aging, and longevity. NPJ Aging Mech Dis, 3, 14. doi:10.1038/s41514-017-0014-y
Berridge, M. J. (1993). Inositol trisphosphate and calcium signalling. Nature, 361(6410), 315-325. doi:10.1038/361315a0
Bishop, N. A., & Guarente, L. (2007). Two neurons mediate diet-restriction-induced longevity in C. elegans. Nature, 447(7144), 545-549. doi:10.1038/nature05904
Blackwell, T. K., Steinbaugh, M. J., Hourihan, J. M., Ewald, C. Y., & Isik, M. (2015). SKN-1/Nrf, stress responses, and aging in Caenorhabditis elegans. Free Radic Biol Med, 88(Pt B), 290-301. doi:10.1016/j.freeradbiomed.2015.06.008
Broughton, S. J., Piper, M. D., Ikeya, T., Bass, T. M., Jacobson, J., Driege, Y., . . . Partridge, L. (2005). Longer lifespan, altered metabolism, and stress resistance in Drosophila from ablation of cells making insulin-like ligands. Proc Natl Acad Sci U S A, 102(8), 3105-3110. doi:10.1073/pnas.0405775102
Carrasco, S., & Merida, I. (2007). Diacylglycerol, when simplicity becomes complex. Trends Biochem Sci, 32(1), 27-36. doi:10.1016/j.tibs.2006.11.004
Cockcroft, S. (2012). The diverse functions of phosphatidylinositol transfer proteins. Curr Top Microbiol Immunol, 362, 185-208. doi:10.1007/978-94-007-5025-8_9
Cockcroft, S., Garner, K., Yadav, S., Gomez-Espinoza, E., & Raghu, P. (2016). RdgBalpha reciprocally transfers PA and PI at ER-PM contact sites to maintain PI(4,5)P2 homoeostasis during phospholipase C signalling in Drosophila photoreceptors. Biochem Soc Trans, 44(1), 286-292. doi:10.1042/BST20150228
Dang, C. V. (2012). Links between metabolism and cancer. Genes Dev, 26(9), 877-890. doi:10.1101/gad.189365.112
de Brouwer, A. P., Bouma, B., van Tiel, C. M., Heerma, W., Brouwers, J. F., Bevers, L. E., . . . Wirtz, K. W. (2001). The binding of phosphatidylcholine to the phosphatidylcholine transfer protein: affinity and role in folding. Chem Phys Lipids, 112(2), 109-119.
Dillin, A., Crawford, D. K., & Kenyon, C. (2002). Timing requirements for insulin/IGF-1 signaling in C. elegans. Science, 298(5594), 830-834. doi:10.1126/science.1074240
Ewald, C. Y., Landis, J. N., Porter Abate, J., Murphy, C. T., & Blackwell, T. K. (2015). Dauer-independent insulin/IGF-1-signalling implicates collagen remodelling in longevity. Nature, 519(7541), 97-101. doi:10.1038/nature14021
Finkel, T., & Holbrook, N. J. (2000). Oxidants, oxidative stress and the biology of ageing. Nature, 408(6809), 239-247. doi:10.1038/35041687
Fontana, L., Partridge, L., & Longo, V. D. (2010). Extending healthy life span--from yeast to humans. Science, 328(5976), 321-326. doi:10.1126/science.1172539
Foster, D. A. (2013). Phosphatidic acid and lipid-sensing by mTOR. Trends Endocrinol Metab, 24(6), 272-278. doi:10.1016/j.tem.2013.02.003
Friedman, D. B., & Johnson, T. E. (1988). A mutation in the age-1 gene in Caenorhabditis elegans lengthens life and reduces hermaphrodite fertility. Genetics, 118(1), 75-86.
Hansen, M., Flatt, T., & Aguilaniu, H. (2013). Reproduction, fat metabolism, and life span: what is the connection? Cell Metab, 17(1), 10-19. doi:10.1016/j.cmet.2012.12.003
Hardie, R. C. (2003). TRP channels in Drosophila photoreceptors: the lipid connection. Cell Calcium, 33(5-6), 385-393.
Iwata, R., Oda, S., Kunitomo, H., & Iino, Y. (2011). Roles for class IIA phosphatidylinositol transfer protein in neurotransmission and behavioral plasticity at the sensory neuron synapses of Caenorhabditis elegans. Proc Natl Acad Sci U S A, 108(18), 7589-7594. doi:10.1073/pnas.1016232108
Kawli, T., Wu, C., & Tan, M. W. (2010). Systemic and cell intrinsic roles of Gqalpha signaling in the regulation of innate immunity, oxidative stress, and longevity in Caenorhabditis elegans. Proc Natl Acad Sci U S A, 107(31), 13788-13793. doi:10.1073/pnas.0914715107
Keinan, O., Kedan, A., Gavert, N., Selitrennik, M., Kim, S., Karn, T., . . . Lev, S. (2014). The lipid-transfer protein Nir2 enhances epithelial-mesenchymal transition and facilitates breast cancer metastasis. J Cell Sci, 127(Pt 21), 4740-4749. doi:10.1242/jcs.155721
Kenyon, C., Chang, J., Gensch, E., Rudner, A., & Tabtiang, R. (1993). A C. elegans mutant that lives twice as long as wild type. Nature, 366(6454), 461-464. doi:10.1038/366461a0
Kenyon, C. J. (2010). The genetics of ageing. Nature, 464(7288), 504-512. doi:10.1038/nature08980
Kim, S., Kedan, A., Marom, M., Gavert, N., Keinan, O., Selitrennik, M., . . . Lev, S. (2013). The phosphatidylinositol-transfer protein Nir2 binds phosphatidic acid and positively regulates phosphoinositide signalling. EMBO Rep, 14(10), 891-899. doi:10.1038/embor.2013.113
Krauss, M., & Haucke, V. (2007). Phosphoinositides: regulators of membrane traffic and protein function. FEBS Lett, 581(11), 2105-2111. doi:10.1016/j.febslet.2007.01.089
Lapierre, L. R., & Hansen, M. (2012). Lessons from C. elegans: signaling pathways for longevity. Trends Endocrinol Metab, 23(12), 637-644. doi:10.1016/j.tem.2012.07.007
Liao, P. C., Lin, H. Y., Yuh, C. H., Yu, L. K., & Wang, H. D. (2008). The effect of neuronal expression of heat shock proteins 26 and 27 on lifespan, neurodegeneration, and apoptosis in Drosophila. Biochem Biophys Res Commun, 376(4), 637-641. doi:10.1016/j.bbrc.2008.08.161
Lin, Y. H., Chen, Y. C., Kao, T. Y., Lin, Y. C., Hsu, T. E., Wu, Y. C., . . . Wang, H. D. (2014). Diacylglycerol lipase regulates lifespan and oxidative stress response by inversely modulating TOR signaling in Drosophila and C. elegans. Aging Cell, 13(4), 755-764. doi:10.1111/acel.12232
Liscovitch, M., & Cantley, L. C. (1995). Signal transduction and membrane traffic: the PITP/phosphoinositide connection. Cell, 81(5), 659-662.
Loewith, R., & Hall, M. N. (2011). Target of rapamycin (TOR) in nutrient signaling and growth control. Genetics, 189(4), 1177-1201. doi:10.1534/genetics.111.133363
Lopez-Otin, C., Blasco, M. A., Partridge, L., Serrano, M., & Kroemer, G. (2013). The hallmarks of aging. Cell, 153(6), 1194-1217. doi:10.1016/j.cell.2013.05.039
Lopez-Otin, C., Galluzzi, L., Freije, J. M. P., Madeo, F., & Kroemer, G. (2016). Metabolic Control of Longevity. Cell, 166(4), 802-821. doi:10.1016/j.cell.2016.07.031
Park, S. K., Tedesco, P. M., & Johnson, T. E. (2009). Oxidative stress and longevity in Caenorhabditis elegans as mediated by SKN-1. Aging Cell, 8(3), 258-269. doi:10.1111/j.1474-9726.2009.00473.x
Payrastre, B., Missy, K., Giuriato, S., Bodin, S., Plantavid, M., & Gratacap, M. (2001). Phosphoinositides: key players in cell signalling, in time and space. Cell Signal, 13(6), 377-387.
Procaccini, C., Santopaolo, M., Faicchia, D., Colamatteo, A., Formisano, L., de Candia, P., . . . Matarese, G. (2016). Role of metabolism in neurodegenerative disorders. Metabolism, 65(9), 1376-1390. doi:10.1016/j.metabol.2016.05.018
Russell, R. C., Fang, C., & Guan, K. L. (2011). An emerging role for TOR signaling in mammalian tissue and stem cell physiology. Development, 138(16), 3343-3356. doi:10.1242/dev.058230
Sakai, N., Ohno, H., Tomioka, M., & Iino, Y. (2017). The intestinal TORC2 signaling pathway contributes to associative learning in Caenorhabditis elegans. PLoS One, 12(5), e0177900. doi:10.1371/journal.pone.0177900
Templeman, N. M., & Murphy, C. T. (2018). Regulation of reproduction and longevity by nutrient-sensing pathways. J Cell Biol, 217(1), 93-106. doi:10.1083/jcb.201707168
Tomioka, M., Adachi, T., Suzuki, H., Kunitomo, H., Schafer, W. R., & Iino, Y. (2006). The insulin/PI 3-kinase pathway regulates salt chemotaxis learning in Caenorhabditis elegans. Neuron, 51(5), 613-625. doi:10.1016/j.neuron.2006.07.024
Toschi, A., Lee, E., Xu, L., Garcia, A., Gadir, N., & Foster, D. A. (2009). Regulation of mTORC1 and mTORC2 complex assembly by phosphatidic acid: competition with rapamycin. Mol Cell Biol, 29(6), 1411-1420. doi:10.1128/MCB.00782-08
Tullet, J. M., Hertweck, M., An, J. H., Baker, J., Hwang, J. Y., Liu, S., . . . Blackwell, T. K. (2008). Direct inhibition of the longevity-promoting factor SKN-1 by insulin-like signaling in C. elegans. Cell, 132(6), 1025-1038. doi:10.1016/j.cell.2008.01.030
Wang, C. T., Chen, Y. C., Wang, Y. Y., Huang, M. H., Yen, T. L., Li, H., . . . Wang, H. D. (2012). Reduced neuronal expression of ribose-5-phosphate isomerase enhances tolerance to oxidative stress, extends lifespan, and attenuates polyglutamine toxicity in Drosophila. Aging Cell, 11(1), 93-103. doi:10.1111/j.1474-9726.2011.00762.x
Wang, L., Feng, Z., Wang, X., Wang, X., & Zhang, X. (2010). DEGseq: an R package for identifying differentially expressed genes from RNA-seq data. Bioinformatics, 26(1), 136-138. doi:10.1093/bioinformatics/btp612
Weir, H. J., & Mair, W. B. (2016). SnapShot: Neuronal Regulation of Aging. Cell, 166(3), 784-784 e781. doi:10.1016/j.cell.2016.07.022
Wilson, M. A., Iser, W. B., Son, T. G., Logie, A., Cabral-Costa, J. V., Mattson, M. P., & Camandola, S. (2017). skn-1 is required for interneuron sensory integration and foraging behavior in Caenorhabditis elegans. PLoS One, 12(5), e0176798. doi:10.1371/journal.pone.0176798
Young, M. D., Wakefield, M. J., Smyth, G. K., & Oshlack, A. (2010). Gene ontology analysis for RNA-seq: accounting for selection bias. Genome Biol, 11(2), R14. doi:10.1186/gb-2010-11-2-r14

(此全文未開放授權)
電子全文
中英文摘要
 
 
 
 
第一頁 上一頁 下一頁 最後一頁 top
* *